FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281246

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281246
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences725249
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT12170.16780443682100904No Hit
GTATGATGATCTCCCAATAACTTTTGGCGGAGGGACCAAGGTGGAGATGA8900.12271647392826464No Hit
GTGTACACCTGTGGCTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT8310.11458133689257069No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC8270.11402980217828636No Hit
GGTGTACACCCTGCCCCCATCCCAGGAGGAGATGACCAAGAACCAGGTCA8140.11223731435686225No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)