FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281256

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281256
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences830431
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAGTAGATAGCCGTGTCCTCACCTCTCAGGCTGTTCATTTGCAGATACA30760.37041006417149647No Hit
ATCTACTACTGTGCGAAAGATGATGAGGACCTTGCAGTGGGAAGAGTTGC27630.3327187930123032No Hit
TTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTAGAGTCTGGGGGAGGCG10030.120780654864763No Hit
ATATTATGCAGACTCCGTGAAGGGCCGATTCACCATCTCTAGAGACAATT8810.10608948847044487No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)