EGAF00005281267 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281267
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1029408
Sequences flagged as poor quality	0
Sequence length	150
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1861	0.18078351829400977	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	1681	0.1632977400603065	No Hit
GTATAATGGTAATTCTCGTACGTTCGGCCAAGGGACCAAGGTGGAAGTCA	1622	0.15756629052814822	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	1303	0.12657760576952967	No Hit
ACTTTAGAAAGTGGGGTCCCTTCAACCTTCAGCGGCAGTGGATCTGGGAC	1089	0.10578895831390468	No Hit
CCATTATACTGCTGGCAGTAATAAGTTGCAAAATCATCAGGCTGCAGGCT	1066	0.10355466442848706	No Hit
GTAATACAGAGCCGTGTCTTCGGCTCTCAGGTTGTTCATTTCCAGATACA	1054	0.10238894587957349	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	3815	0.0	43.213696	4
ATCAACG	3880	0.0	42.489754	3
GTATCAA	3980	0.0	42.446167	1
CAACGCA	3930	0.0	41.949177	5
TATCAAC	4025	0.0	40.823833	2
AACGCAG	4140	0.0	39.82132	6
CGCAGAG	4350	0.0	38.064407	8
GCAGAGT	4970	0.0	33.171078	9
ACGCAGA	5170	0.0	31.887863	7
TACGCAA	125	5.370726E-4	28.79655	7
TACATGG	3785	0.0	23.800657	2
GTACATG	3805	0.0	23.527334	1
CAATACG	160	0.0022660263	22.497307	4
AGGCCGT	290	3.516925E-7	22.342152	6
ACATGGG	4125	0.0	21.11747	3
GTGTAGA	515	1.8189894E-12	21.027601	1
AAGGCCG	310	6.6814937E-7	20.900723	5
TACACCG	245	5.3990752E-5	20.568966	5
TACGCAG	930	0.0	20.126621	5
ACTACGC	930	0.0	20.126621	3