FastQCFastQC Report
Sat 4 Jun 2022
EGAF00005281285

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281285
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences54656870
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA1690530.309298721276941No Hit
ACGGGCTGTTAATTGTCAGTTCAGTGTTTTAATCTGACGCAGGCTTATGC1049860.19208198347252597No Hit
CCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATAC966510.17683229939804457No Hit
AAGCCGCAGGCTCCACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGT859010.1571641405737284No Hit
CGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGG739160.13523643047982806No Hit
ACGCCGAGTTCCTTTTACTTTTTTTAACCTTTCCTTATGAGCATGCCTGT726360.13289454738260717No Hit
GCTGCTTTTAGGCCTACTATGGGTGTTAAATTTTTTACTCTCTCTACAAG690970.12641960653802534No Hit
AGTTGGTTGATTGTAGATATTGGGCTGTTAATTGTCAGTTCAGTGTTTTA628380.11496816411184906No Hit
CCACCTACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAG595170.10889207523226267No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)