FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281309

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281309
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1005971
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTATTACTGTGCGACAGGGATTAGGTATTATCATGGTAGGAGTGGTGA28640.28470005596582804No Hit
TCTAAGAGGTGTCCAGTCTCAGGTGCGTCTGGTGGAGTCTGGGGGAGGCG27470.27306950200353686No Hit
ATATAGGTATTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAG26930.267701554020941No Hit
GTAATACAAAGCCGTGTCCTCAGCTCTCAGGCTGTTCATCTGCAGATCCA24400.24255172365803784No Hit
CTCCTGTAGTGCCTCTGCATCCATTTTCAGTGATTACACCATGCACTGGG20950.20825650043589725No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT17080.1697862065606265No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16910.16809629701055No Hit
GTATTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATT15990.15895090415131252No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT15900.1580562461542132No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC15340.15248948528337297No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT15340.15248948528337297No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA14960.14871204040673142No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC14130.14046130554459324No Hit
TTATTACTGCGTGCAAACTACACACTTTCCGTACAACTTTGGCCAGGGGA13200.13121650624123357No Hit
TACCTATATTGTCCATCATATGATATAACCGCCACCCACTCCAGCCCCTT13200.13121650624123357No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC13000.12922837735879067No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC12180.12107704894077465No Hit
GTTTATTACTGCGTGCAAACTACACACTTTCCGTACAACTTTGGCCAGGG11860.11789604272886595No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA11850.1177966362847438No Hit
TGGTAGGAGTGGTGACAATGATGACATTCACTACTGGGGTATGGACGTCT11690.11620613317878944No Hit
CCCCAGTAGTGAATGTCATCATTGTCACCACTCCTACCATGATAATACCT11570.11501325584932368No Hit
GTATTACTGTGCGACAGGGATTAGGTATTATCATGGTAGGAGTGGTGACA11190.1112358109726821No Hit
GTGATGGAGACACGTACTTGAGTTGGCTTCAGCAGAGGCCAGGCCAGCCT11030.10964530786672776No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG11020.10954590142260562No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG10900.10835302409313986No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG10820.10755777254016269No Hit
CTACTGGGGTATGGACGTCTGGGGCCAAGGGACCACGGTCGTCGTCTCCT10790.10725955320779623No Hit
GTAATAAACCGCGACATCGTCAGCTTCCACCCTGCTGATTTTCAGTGTGA10520.1045755792164983No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)