FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281310

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281310
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1005971
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTGTATTACTGTGCGACAGGGATTAGGTATTATCATGGTAGGAGTGGTGA27070.26909324423865105No Hit
ATATAGGTATTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAG26260.2610413222647571No Hit
TCTAAGAGGTGTCCAGTCTCAGGTGCGTCTGGTGGAGTCTGGGGGAGGCG23630.23489742746063258No Hit
GTAATACAAAGCCGTGTCCTCAGCTCTCAGGCTGTTCATCTGCAGATCCA23430.23290929857818962No Hit
CTCCTGTAGTGCCTCTGCATCCATTTTCAGTGATTACACCATGCACTGGG19810.19692416580597252No Hit
GTATTATGCAGACTCCGTGAAGGGCCGATTCAGCATCTCCAGAGACAATT15650.15557108505115952No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT14680.1459286599713113No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT14480.14394053108886837No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT14390.14304587309176905No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC14140.14056071198871536No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA13900.13817495732978388No Hit
TACCTATATTGTCCATCATATGATATAACCGCCACCCACTCCAGCCCCTT13750.13668386066795166No Hit
GTTTATTACTGCGTGCAAACTACACACTTTCCGTACAACTTTGGCCAGGG13100.13022244180001213No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC12560.12485449381741621No Hit
TTATTACTGCGTGCAAACTACACACTTTCCGTACAACTTTGGCCAGGGGA12080.12008298449955317No Hit
GTATTACTGTGCGACAGGGATTAGGTATTATCATGGTAGGAGTGGTGACA11730.11660375895527803No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC11630.11560969451405657No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA11620.11551028806993442No Hit
CCCCAGTAGTGAATGTCATCATTGTCACCACTCCTACCATGATAATACCT11130.11063937230794924No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG10990.10924768209023919No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC10950.10885005631375058No Hit
CTCCTACCATGATAATACCTAATCCCTGTCGCACAGTAATACAAAGCCGT10300.10238863744581107No Hit
TGGTAGGAGTGGTGACAATGATGACATTCACTACTGGGGTATGGACGTCT10180.10119576011634529No Hit
GTCCTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGT10160.10099694722810101No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG10140.10079813433985672No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)