FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281313

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281313
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences929603
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTAATAAACAGCCGTGTCCTCAGCTCTCAGGCCGCTCATTTGTAGATACA20160.21686677000827237No Hit
GTTTATTACTGTGCGAGAGGCTTTGACGATAGTAGTGGTTATTTCTATGA16940.1822283275763955No Hit
ACTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTGGC16770.18039958993247657No Hit
TTTAAGAGGTGTCCACTGCCAGGTGCAACTGGTGGAGTCTGGGGGAGGCG11240.12091183010381852No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT11220.12069668449865158No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT10900.11725435481598058No Hit
CTACTATACACTGGGTCCGCCAGGCTCCAGGCAAGGGGCTGGAGTGGGTG10080.10843338500413618No Hit
TCCTAAGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC9980.10735765697830149No Hit
GACTTAGGACGGTCAGCCTAGTCCCTCCGCCGAATACCACAATGGTCAGC9940.10692736576796763No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT9920.10671222016280069No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT9900.10649707455763374No Hit
CTCCATAAGGGGCCGATTCACCGTTTCCAGAGACAACTCCAAGAAGTCTC9830.10574406493954946No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA9770.10509862812404865No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC9320.10025785200779257No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT9310.10015027920520911No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)