EGAF00005281343 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281343
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2400602
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAATAACTGGCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGA	5652	0.23544094356332287	No Hit
GTAATACACAGCCGTGTCGTCGTCTCTCAGGCTATTCATTTGCAGATACA	4807	0.20024143943894074	No Hit
GTGTATTACTGTGCGAGAGATGACTACACTGACTACTGGGAAGACACCTA	4574	0.19053554066854897	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	4010	0.1670414337736951	No Hit
ACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGA	3984	0.1659583721083295	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3496	0.14563013777377506	No Hit
TTATTATACTGCTGACAGTAATAAACTGCAGAATCTTCAGACTGCAGGCT	3122	0.13005071227966986	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	2947	0.12276087414740135	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	2768	0.11530441114353815	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC	2746	0.11438797434976727	No Hit
GTACTACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCC	2745	0.11434631813186859	No Hit
GTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAACGGTCTGGAGTGGG	2688	0.11197191371164399	No Hit
GTTATTATACTGCTGACAGTAATAAACTGCAGAATCTTCAGACTGCAGGC	2677	0.11151369531475855	No Hit
GTTAGGACCCAGACGGAACCATGGAAGCCCCAGCGCAGCTTCTCTTCCTC	2642	0.11005572768830485	No Hit
ATGTATGGTAGTACCACTCCCACTAATGTATGAAACCCACTCCAGACCGT	2559	0.10659826160271464	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	2478	0.1032241079529218	No Hit
ACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGACAATG	2418	0.10072473487900119	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GGTATCA	1920	75.03354	1
GTATCAA	4880	70.85134	1
ATCAACG	5275	63.19813	3
TCAACGC	5355	62.253994	4
CAACGCA	5715	58.457253	5
TATCAAC	5755	58.17727	2
AACGCAG	5910	56.52728	6
CGCAGAG	6630	50.38752	8
ACGCAGA	7570	44.416008	7
GCAGAGT	7740	43.533485	9
GTACATG	6120	34.015205	1
TACATGG	5965	33.194637	2
ACATGGG	6315	31.582907	3
GTACACG	1645	30.200897	5
TACACGG	1685	29.910643	6
CAGCGCT	965	29.097511	9
ACACGGG	1820	27.295826	7
GAATACG	570	26.525465	9
CATGGGG	4160	26.308493	4
CAGAGTA	8335	24.531904	9