EGAF00005281344 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281344
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2400602
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTATAATAACTGGCCTCCGTACACTTTTGGCCAGGGGACCAAGCTGGAGA	5198	0.2165290206373235	No Hit
GTAATACACAGCCGTGTCGTCGTCTCTCAGGCTATTCATTTGCAGATACA	4502	0.18753629297984423	No Hit
GTGTATTACTGTGCGAGAGATGACTACACTGACTACTGGGAAGACACCTA	3911	0.16291746820172606	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	3773	0.15716891013170864	No Hit
ACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCCAGAGA	3605	0.15017066552473088	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3287	0.13692398823295157	No Hit
TTATTATACTGCTGACAGTAATAAACTGCAGAATCTTCAGACTGCAGGCT	3215	0.13392474054424683	No Hit
GTTATTATACTGCTGACAGTAATAAACTGCAGAATCTTCAGACTGCAGGC	2702	0.11255510076222548	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	2667	0.11109713313577178	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	2579	0.10743138596068819	No Hit
GTATAGCATGAACTGGGTCCGCCAGGCTCCAGGGAACGGTCTGGAGTGGG	2495	0.1039322636571993	No Hit
GTACTACCATACATTATGCAGACTCTGTGAGGGGCCGATTCACCATCTCC	2454	0.10222435872335356	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	4700	70.16456	1
GGTATCA	1735	64.74038	1
ATCAACG	5215	62.132294	3
TCAACGC	5240	61.697163	4
TATCAAC	5555	58.459038	2
CAACGCA	6045	53.48108	5
AACGCAG	6210	52.40902	6
CGCAGAG	6720	48.646862	8
ACGCAGA	7445	43.61944	7
GCAGAGT	7730	42.006844	9
GTACATG	5970	30.634413	1
TACATGG	5930	30.355995	2
ACATGGG	5895	30.291939	3
CAGAGTA	8200	27.745737	9
CAGCGCT	1065	26.365622	9
GAATACG	580	24.827044	9
GGCAGCG	1355	23.913406	7
CATGGGG	3660	22.427141	4
GTATAAT	4965	22.333233	1
GTGCTAG	935	22.332458	1