FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281357

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281357
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences909553
Sequences flagged as poor quality0
Sequence length150
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGTGTACACCCTGCCCCCATCCCAGGAGGAGATGACCAAGAACCAGGTCA25580.2812370472089037No Hit
GTCTCTGGTGACTCCATCAGCAAAAGTGATTACTACTGGGGCTGGATCCG22470.24704442731759446No Hit
GTGTACACCTGTGGCTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT22250.2446256567786594No Hit
TCCTACGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC21310.23429090993048232No Hit
CTCCTGCACTGGGACCAGCACCAACATCGGGGCAGGTTATGATGTACACT17050.18745471676746708No Hit
CCTCAGAGGAGGGCGGGAACAGAGTGACCGAGGGGGCAGCCTTGGGCTGA16760.18426633742068904No Hit
GACGTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGAACCGCTCAGG16390.18019840515066193No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT16340.17964868457363123No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC16000.1759105846498225No Hit
GATGTACACTGGTACCGGCAGCTTCCAGGCACAGCCCCCCAACTCCTCAT15530.17074321122573397No Hit
ACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACACGTCC15500.17041337887951552No Hit
GTTTGGAGGGTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCT14740.162057626108649No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT13990.15381181745318856No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT13230.14545606468232197No Hit
GTGTGGTGGTCTCCACTCCCGCCTTGACGGGGCTGCTATCTGCCTTCCAG12840.14116824418148255No Hit
GGTTATGATGTACACTGGTACCGGCAGCTTCCAGGCACAGCCCCCCAACT12440.136770479565237No Hit
GTGGTGGACGTGAGCCAGGAAGACCCCGAGGTCCAGTTCAACTGGTACGT12330.13556109429576946No Hit
GGTTTATTGAGTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGA11990.13182299437196074No Hit
GTTCCCGCCCTCCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGT11420.1255561797938108No Hit
GTTTAGAACCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGC11170.12280757690865732No Hit
CTTATGAGACACACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGA11010.1210484710621591No Hit
GCCTTGGGCTGACGTAGGACGGTCAGCTTGGTCCCTCCGCCGAACACCGA10830.11906947698484859No Hit
GTCCTGCACCAGGACTGGCTGAACGGCAAGGAGTACAAGTGCAAGGTCTC10590.11643081821510126No Hit
GTAATAATCAGCCTCATCCTCAGCCTGGAGCCCAGTGATGGCCAGGGAGG10340.1136822153299478No Hit
CTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCACTGCTCA10300.11324243886832322No Hit
GTGTAGTGGTTGTGCAGAGCCTCATGCATCACGGAGCATGAGAAGACATT10220.11236288594507413No Hit
GTGCAGGGAGAAGGGCTTGATGCCTTGGGGTGGGAGGAGAGACCCCTCCC10110.11115350067560659No Hit
CTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCATGCGTGACCTGG10090.11093361244479431No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCC10060.11060378009857588No Hit
GTGCTCCCTTCATGCGTGACCTGGCAGCTGTAGCTTCTGTGGGACTTCCA9960.1095043389445145No Hit
ATCTACTACAACCCGTCCCTCAAGAGTCGAGTCACCATGTCAGTAGACAC9950.10939439482910837No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA9950.10939439482910837No Hit
CACCAGTGTGGCCTTGTTGGCTTGAAGCTCCTCAGAGGAGGGCGGGAACA9950.10939439482910837No Hit
TCCAGGCACAGCCCCCCAACTCCTCATCTATGGTAACAACAAGCGGCCCT9640.10598612725151806No Hit
CCTCCACGCCATCCACGTACCAGTTGAACTGGACCTCGGGGTCTTCCTGG9440.10378724494339528No Hit
GTACGTGCTGTTGAACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA9380.10312758025095843No Hit
GCTCAGGCGTCAGGCTCAGATAGCTGCTGGCCGCGTACTTGTTGTTGCTT9110.10015908913499269No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)