EGAF00005281378 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281378
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	2642173
Sequences flagged as poor quality	0
Sequence length	150
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATACACAGCCGTGTCCTCAGGTCTCAGGCTGTTCATGTGAAGATAGA	6620	0.2505513454266621	No Hit
GTGTATTACTGTGCAAAGTCTAAGGGTTTGGAGTGGTTCACAGTCGTCGG	5103	0.19313648273599043	No Hit
GCCCTACACTGGCTCCGCCAGGCTCCAGGCAAGGGGCTAGAGTGGCTGGC	4841	0.18322040229765424	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	3547	0.13424556227014658	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT	3206	0.12133951864620524	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT	3165	0.1197877656005114	No Hit
CCCTTAGACTTTGCACAGTAATACACAGCCGTGTCCTCAGGTCTCAGGCT	2962	0.11210469564256391	No Hit
TTTAGGAGGTGTCCAGTGTCAGGTGCAACTGGTGGAGTCCGGGGGAGGCT	2821	0.10676817907078757	No Hit
GTCTAAGGGTTTGGAGTGGTTCACAGTCGTCGGATACTACTTTGACTACT	2709	0.10252924392157516	No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC	2649	0.10025838580592565	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	4900	75.08754	1
TCAACGC	5660	64.501144	4
ATCAACG	5715	63.75441	3
GGTATCA	2305	60.912544	1
TATCAAC	6170	59.51973	2
CAACGCA	6280	57.90169	5
AACGCAG	6455	56.11202	6
CGCAGAG	7260	49.69186	8
ACGCAGA	8135	44.169975	7
GCAGAGT	8505	41.98726	9
GTACATG	6745	30.743519	1
ACATGGG	6945	29.238344	3
TACATGG	6960	28.968414	2
CAGCCGT	4625	24.751162	9
TACACGG	1910	24.128525	6
GTACACG	1920	23.626469	5
CATGGGA	3425	23.54688	4
AATACAC	5415	23.271027	3
CAGCGCT	1385	22.87247	9
CATGGGG	4420	22.318975	4