FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281379

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281379
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2528882
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCATAGGATTGGCAGAAATAATCAGCCTCATCCTCAACCTGGAGCCCAG42610.16849342911215312No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC41830.16540906218637325No Hit
TCCTATGACAGCGGCCTGATTCGTGTGGTGTTCGGCGGAGGGACCAAACT38510.15228073116895133No Hit
GACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAACACCACACGAATCAGG38190.1510153498660673No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36420.14401620953448996No Hit
GATGTACACTGGTACCAGCAACTTCCAGGAACAGCCCCCAAACTCCTCAT29320.11594056187675028No Hit
GCCTTGGGCTGACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAACACCAC28780.11380523092813345No Hit
CTCCTGCACTGGGAGCAGCTCCAACATCGGGGCAGGTTATGATGTACACT25710.10166547905358968No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)