FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281380

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281380
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2528882
Sequences flagged as poor quality0
Sequence length150
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC36630.1448466160145076No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT36240.14330443255161768No Hit
TCCTATGACAGCGGCCTGATTCGTGTGGTGTTCGGCGGAGGGACCAAACT33050.13069016268849237No Hit
GTCATAGGATTGGCAGAAATAATCAGCCTCATCCTCAACCTGGAGCCCAG32330.12784305475700328No Hit
GACCTAGGACGGTCAGTTTGGTCCCTCCGCCGAACACCACACGAATCAGG30720.12147660507686796No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)