EGAF00005281408 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281408
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	1232707
Sequences flagged as poor quality	0
Sequence length	150
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATATACGGCCGAGTCCTCAGATCTCAGGCTGCTCAACTCCATGTAGA	2902	0.23541685088183972	No Hit
TCTATAGGGATGGCAACCGGCCCTCTGGAATCCCTGAGCGATTCTCTGGC	2613	0.21197251252730778	No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC	2425	0.19672152425515552	No Hit
GTCTACATGGAGTTGAGCAGCCTGAGATCTGAGGACTCGGCCGTATATTA	2262	0.18349859293408735	No Hit
GTATATTACTGTGCGAGAGATCTGTTCGGGGATTGTAGTGGCGAAAGATG	2154	0.1747373869054041	No Hit
GGCCTGGACCGCTCTCCTTCTGAGCCTCCTTGCTCACTTTACAGGTTCTG	1933	0.15680936345782087	No Hit
GACCTAGGACGGTCAGCCTGGTCCCTCCGCCGAACACCCAGCTGCTGTCC	1825	0.14804815742913766	No Hit
GTCTGGGGCTGAGGTGAAGAAGCCTGGGTCCTCGGTGAGGGTCTCCTGCA	1619	0.13133696815220486	No Hit
CCATGTAGACTGTGCTCGTGGATTCGTCCGCGGTAATCGTGAGTCTGCCC	1556	0.12622626463547298	No Hit
CCTATGAACTGACTCAGCCACTCTCAGAGTCAGTGGCCCTGGGACAGATG	1530	0.12411708540634554	No Hit
GCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCCTCTGAGGAGC	1498	0.12152117250895791	No Hit
GCCTTGGGCTGACCTAGGACGGTCAGCCTGGTCCCTCCGCCGAACACCCA	1422	0.11535587937766233	No Hit
ATGTACAGGTGTCCAGCCCCAGGTGCAGCTGGTGCAGTCTGGGGCTGAGG	1413	0.11462577887527206	No Hit
CCTCTGAGGAGCTTCAAGCCAACAAGGCCACACTGGTGTGTCTCATAAGT	1314	0.10659467334897911	No Hit
CCTATGAACATTCTGTAGGGGCCACTGTCTTCTCCACGGTGCTCCCTTCA	1286	0.10432324956376494	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAACGC	1290	61.938797	4
ATCAACG	1360	57.692192	3
CAACGCA	1395	57.276737	5
AACGCAG	1520	52.566475	6
TATCAAC	1615	49.02862	2
ACGCAGA	1705	46.862785	7
CGCAGAG	1830	42.875076	8
TATACGG	1545	38.67044	5
ATACGGC	1590	37.57599	6
TACGGCC	1650	35.33707	7
CGGCCGA	1705	33.77498	9
ACGGCCG	1780	33.16067	8
GGTATCA	615	32.808643	1
GCAGAGT	2435	31.926716	9
GTAATAT	2175	31.143969	1
GTACATG	3070	30.749517	1
ATATACG	2015	30.365005	4
GTCTACA	1890	29.35853	1
AATATAC	2165	28.926163	3
TAATATA	2330	28.73138	2