EGAF00005281418 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281418
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	782223
Sequences flagged as poor quality	0
Sequence length	150
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ATAATACACAGCCGTGTCTGCGGCGGTCACAGAGTTCACGTTCAGGGAGA	1444	0.18460208917405904	No Hit
GTCTCTGGTGGCTCCATCAGCAGGAGTCATTACTTCTGGGTCTGGATTCG	1232	0.15749984339504208	No Hit
GTGTATTATTGTGCGAGTATTGTGGGAGCCATTCTTGAAGACTGGGGCCA	1146	0.14650553614506348	No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT	1055	0.13487202498520243	No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT	1047	0.13384929872939047	No Hit
GTATTATTGTGCGAGTATTGTGGGAGCCATTCTTGAAGACTGGGGCCAGG	1043	0.1333379356014845	No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA	1013	0.1295027121421896	No Hit
CAATAATACACAGCCGTGTCTGCGGCGGTCACAGAGTTCACGTTCAGGGA	903	0.11544022612477517	No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGAGCGCCTGAGT	858	0.10968739093583288	No Hit
GTCCCTCAACTGCGCTGTCTCTGGTGGCTCCATCAGCAGGAGTCATTACT	795	0.10163342167131369	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTAGCGT	40	0.006223497	53.988636	3
GTATCAA	1400	0.0	38.095406	1
TCAACGC	1305	0.0	38.060955	4
ATCAACG	1405	0.0	35.864338	3
CAACGCA	1420	0.0	35.48549	5
AACGCAG	1530	0.0	33.40473	6
CAGCCGT	1100	0.0	32.06598	9
GAACCGT	90	0.003756658	31.993265	6
TATCAAC	1615	0.0	31.64659	2
TACACGG	615	0.0	31.603106	6
CGCAGAG	1645	0.0	30.631853	8
GTACACG	655	0.0	29.673145	5
TACACAG	1870	0.0	27.716093	5
AATACAC	1325	0.0	27.707378	3
ACACGGG	700	0.0	26.737232	7
ATAATAC	1305	0.0	26.509382	1
GTACATG	2225	0.0	25.589746	1
TATGTAC	845	0.0	25.55675	2
GCAGAGT	1955	0.0	25.03821	9
TAATACA	1485	0.0	24.722069	2