FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281420

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281420
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences982130
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATAATAGACAGCCGTGTCTTCAGATCTCAGGCTACTCAGCTCCATGTAGG22990.23408306436011528No Hit
GTCTATTATTGTGCGAGATCTCAGTATAGTCGCTCGTCGGAGTACAACTG21690.2208465274454502No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT16720.17024222862553837No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT14600.14865649150316151No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC13630.13877999857452678No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA13360.1360308716768656No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA13260.13501267652958365No Hit
GGTCCAGGTTGTGCAGTCTGGGGCTGAAATGAAGAAGCCTGGGGCCTCAG13190.1342999399264863No Hit
GTCTGGGGCTGAAATGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCC12770.1300235203079022No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC12290.12513618360094897No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT12270.12493254457149258No Hit
GTATGTAGACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC10860.11057599299481738No Hit
GCCTACATGGAGCTGAGTAGCCTGAGATCTGAAGACACGGCTGTCTATTA10620.10813232464134076No Hit
GTATTACTGTCAGCTGTATGGTATCTCACCGTACCCTTTTGGCCAGGGGA10600.10792868561188439No Hit
GTCCTGGTGCAGGACGGTGAGGACGCTGACCACACGGTACGTGCTGTTGT10510.10701230997933063No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG10160.1034486269638439No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCATTCAGCCAGTCCTGGTGCA10120.10304134890493112No Hit
GTACAACAGCACGTACCGTGTGGTCAGCGTCCTCACCGTCCTGCACCAGG9980.10161587569873641No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)