FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281450

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281450
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences706127
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTATTACTGTGCGAGAGTGGGGGGTTATTACCCCAGTTGGCACTACCT26730.37854380302693424No Hit
GTAATAGACAGCCGTGTCCTCGGCTCTCAGGCTGTTCATTTCCAGAAACA23350.3306770595091251No Hit
ATATTACGCAGACTCAGTGAAGGGCCGATTCACCATCTCCAGAGACAACG12900.18268668384015907No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGCTTTGGAGATGGTTTT11740.16625904405298197No Hit
GTACGTGCTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCA10890.15422154938134358No Hit
CTGTAGGACAGCCGGGAAGGTGTGCACGCCGCTGGTCAGGGCGCCTGAGT10630.15053949218766596No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGCGCGACCCCGAGAGCCT9970.14119273161909968No Hit
GGTGTACACCCTGCCCCCATCCCGGGATGAGCTGACCAAGAACCAGGTCA9590.13581126341295546No Hit
ACCTTGACTACTGGGGCCAGGGAACCCTGGTCACCGTCTCCTCAGCCTCC9520.13481994032234995No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC9260.13113788312867233No Hit
CTGTTGTACTGCTCCTCCCGCGGCTTTGTCTTGGCATTATGCACCTCCAC8560.12122465222261718No Hit
GCCCAGGGCCGCTGTGCCCCCAGAGGTGCTCTTGGAGGAGGGTGCCAGGG7920.11216112682279533No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT7640.10819583446037327No Hit
CCTCCACGCCGTCCACGTACCAGTTGAACTTGACCTCAGGGTCTTCGTGG7500.10621318827916224No Hit
GTATTACTGTCAGCAGTATGGTAGCTCACCTCAGACGTTCGGCCAAGGGA7480.10592995311041781No Hit
GTTGGAGACCTTGCACTTGTACTCCTTGCCGTTCAGCCAGTCCTGGTGCA7070.10012363215115695No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)