FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281458

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281458
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences713061
Sequences flagged as poor quality0
Sequence length150
%GC50

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATGGAAACACCTTCTTCTTGGATTGGTTTCAGCAGAGGCCAGGCCAA19040.26701782876920765No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT14780.2072753943912232No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC11420.16015460107901008No Hit
CCCTTAGACTCTCCTGTGAAGCCTCTGGATTCACCTTTCGTAATAATTGG11110.15580714693413325No Hit
GTGTACACCTGTGGTTCTCGGGGCTGCCCTTTGGTTTTGGAGATGGTTTT11080.1553864255652742No Hit
GTATGTACACGGGGTACGTGCCAAGCATCCTCGTGCGACCGCGAGAGCCC11030.1546852232838425No Hit
GGTGTACACCCTGCCCCCATCCCGGGAGGAGATGACCAAGAACCAGGTCA10690.14991704777010662No Hit
TTCCATCACTGTGCACGAGGCTTTGACTAGACCTGCAGGAGATGGAGGCC9520.13350891438460383No Hit
CTGTAGGACAGCTGGGAAGGTGTGCACGCCGCTGGTCAGAGCGCCTGAGT9330.1308443457151632No Hit
GAGTAGACCTTGCATGCAGTAATAAACGCCAACATCCTCAGCCTCCACCC8960.12565544883256832No Hit
CTCTGGGATAGAAGTTATTCAGCAGGCACACAACAGAGGCAGTTCCAGAT8740.12257015879426865No Hit
TTATTACTGCATGCAAGGTCTACTCTGGCCTTGGACGTTCGGCCAAGGGA8270.11597885734881026No Hit
ATCCCAGAGAGGCCAAAGTACAGTGGAAGGTGGATAACGCCCTCCAATCG8000.11219236502907887No Hit
GTCCTACAGTCCTCAGGACTCTACTCCCTCAGCAGCGTGGTGACCGTGCC7990.11205212457279251No Hit
GTTCTATGTGGACTCTGTGAAGGGCCGATTCACCATCTCCAGAGACAACG7870.11036923909735633No Hit
CTCCCAGGAGAGTGTCACAGAGCAGGACAGCAAGGACAGCACCTACAGCC7740.1085461131656338No Hit
CTCCAGAGACAACGCCAAGAACTCAGTGTATCTGCAAATGAACAGCCTGA7720.10826563225306109No Hit
GTGGTGGACGTGAGCCACGAAGACCCCGAGGTCCAGTTCAACTGGTACGT7540.10574130403990684No Hit
GCCCAGGGCCGCTGTGCTCTCGGAGGTGCTCCTGGAGCAGGGCGCCAGGG7340.10293649491417985No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)