EGAF00005281475 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281475
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	734286
Sequences flagged as poor quality	0
Sequence length	150
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GTAATACATAGCCGTGTCCTCAGGTCTCAGGCTGTCCACGTCCAGATACA	1518	0.20673143706947975	No Hit
ATGTATTACTGTGCGAGACCTCCCGGAAGCCTACGGCTATGGTTAATGGA	1309	0.17826841312513106	No Hit
GAGTTATAGTATCCCACTCACTTTCGGCGGGGGGACGAAGGTGGAGATCA	1190	0.16206219375011918	No Hit
GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	1188	0.16178982031524503	No Hit
CTATAACTCTGTTGACAGTAGTAAGTTGCAGAATCTTCAGGTTGCAGACT	921	0.125427966759546	No Hit
AATAAATACTACGCAGACTCCCTGAAGGGCCGATTCACCATCTCCAGAGA	919	0.12515559332467185	No Hit
TTTAAGAGGTGTCCAGTGTCAGGTGCAGCTGGTGGAGTCTGGGGGAGACG	902	0.12284041912824159	No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT	822	0.11194548173327559	No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC	741	0.10091435762087252	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GTATCAA	1400	71.00609	1
TCAACGC	1465	66.35792	4
ATCAACG	1495	65.507996	3
CAACGCA	1505	64.111404	5
AACGCAG	1625	59.377026	6
TATCAAC	1675	58.46833	2
CGCAGAG	1880	51.31624	8
GCAGAGT	2185	44.1531	9
GGTATCA	1095	34.866333	1
ACGCAGA	2865	33.67348	7
GTAATAC	975	31.030529	1
GTACATG	1650	30.560368	1
TACATAG	1035	29.91542	5
ACATGGG	1730	28.721003	3
TACATGG	1760	27.822285	2
TACACGG	405	26.668787	6
CTATAAC	780	24.935247	1
GTACACG	435	24.82956	5
ACATAGC	1180	24.40872	6
TAGCCGT	1160	24.205524	9