FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281482

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281482
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences557477
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTATGGGTAGTGGCATTTGGGTGTTCGGCGGAGGGACCAAGGTGACCG10400.1865547816322467No Hit
GTAATACACAGCCGTGTCCTCAGCTCTCAGGCTGTCCATTTGTAGATACA9860.17686828335518773No Hit
CCCATAGACAGCACACAGTAATAATCAGATTCATCATCTGCCTGGGCGCC9510.17058999743487174No Hit
GTGTATTACTGTGCGAGGGCGCTGGGATTCCAAGGCCTCTACCACTACTC8240.14780878852401086No Hit
GTAATAATCAGATTCATCATCTGCCTGGGCGCCCGTGATGGTGAGGGCAG7030.12610385719948985No Hit
TCCTAGGTCAGCCCAAGGCTGCCCCCTCGGTCACTCTGTTCCCGCCCTCC6440.11552046093381431No Hit
GATTATTACTGTGTGCTGTCTATGGGTAGTGGCATTTGGGTGTTCGGCGG6110.10960093420894494No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)