FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281496

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281496
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences959585
Sequences flagged as poor quality0
Sequence length150
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGTATATGGAACTGAGCAGCCTGAGATCTGACGACACGGCTGTGTATTA27680.28845803133646314No Hit
GTAATACACAGCCGTGTCGTCAGATCTCAGGCTGCTCAGTTCCATATACA26990.28126742289635626No Hit
GTGTATTACTGTGCGAGAGGCATCTCTTCCGGCAAGTACGACTTTTTATC24010.25021233137241616No Hit
CTCCTGGGAGTTACCCGATTGGAGGGCGTTATCCACCTTCCACTGTACTT16230.1691356159172976No Hit
ATATGGAACTGAGCAGCCTGAGATCTGACGACACGGCTGTGTATTACTGT15950.1662176878546455No Hit
CATATACACTGTGCTCGCGGATGTGTCCCTGTAAACGGTGACTCTGCCCT14930.15558809276927005No Hit
CTCTAACACTCTCCCCTGTTGAAGCTCTTTGTGACGGGCGAGCTCAGGCC13180.13735104237769452No Hit
GTATATTGCCAACTGGTTAGCCTGGTATCAGCAGAAACCAGGGAAGGCCC12360.12880568162278483No Hit
GTCTGGGGCTGAAGTGAAGAAGCCTGGGGCCTCAGTGAAGGTTTCCTGCA12270.12786777617407524No Hit
TCTCTACACAGTGAAACTTTTTTTAAAAAGAATAGTAAAGAAAATGCGGA12180.12692987072536566No Hit
GTTCCATATACACTGTGCTCGCGGATGTGTCCCTGTAAACGGTGACTCTG11640.12130243803310807No Hit
GTGTACAGGTCCCCGGAGGCATCCTGGCTGGGTGGGAAGTTTCTGGCGGT10550.1099433609320696No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)