FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281522

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281522
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14685557
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT48900.017.963661
TCTATTG50350.017.5258161
ACTGATG46300.017.3949851
GATGCTA44650.017.320771
TAGTTGG46350.017.2898771
GGTATTG39400.017.216411
CTGCCTA63650.016.9759651
GGGAATG42150.016.947661
TTGACTT47600.016.9409311
GATGAAA44750.016.8572791
TACGGAT37550.016.8123551
CAATGGA47600.016.6814338
GGAACTT36950.016.6250551
GGGACCT39150.016.5596961
TGATTTC33850.016.4628751
ATTGGTG33900.016.4385931
CTTTGCG47850.016.4342441
CCTATTA45300.016.4096661
TGCGGGT30000.016.3412021
ATCGAGT28100.016.3067841
Produced by FastQC (version 0.11.5)