FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281531

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281531
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14537877
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCAAGGCC470508832.364340405411326No Hit
GATGCCAA372752025.640057348125865No Hit
AGGTATTG322631622.192483813145483No Hit
CTCCTAGT265986018.2960689514707No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)