FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281532

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281532
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14912576
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT45300.017.6649651
GATGCTA50400.017.5644151
ACTGATG47900.017.5623041
CAATGGA47650.017.522268
TCTATTG49800.017.414491
GGGAATG39250.017.3041841
TAGTTGG45650.017.222761
GGTATTG39000.017.1329781
TTGACTT49400.017.1302781
GGGACCT37800.016.9359341
CTTTGCG49550.016.8967341
CGATTGA45000.016.8269081
CTGCCTA58650.016.6286741
CTCGAAA40300.016.58031
GATGAAA43900.016.5421921
ATCGAGT27700.016.502791
CCTATTA44650.016.4659521
TGATTTC33550.016.3980081
CTAATGG37150.016.3706441
CCTTACG40800.016.3525941
Produced by FastQC (version 0.11.5)