FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281548

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281548
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19067662
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGCTCTC618560832.44030652525727No Hit
TTCGCTGA446010723.390948507478264No Hit
ACAAGAAT408482521.42278901314697No Hit
CATTAGCG403829321.17875280147089No Hit
GGGCTCTA263400.1381396418711429No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)