EGAF00005281560 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281560
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19406763
Sequences flagged as poor quality	0
Sequence length	58
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	303804	1.5654542697306089	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	47197	0.2431987240736644	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	40266	0.20748437026824104	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	33987	0.17512967000215338	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	33950	0.17493901481663893	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	21839	0.11253293503919228	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	21645	0.11153328352595433	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	115750	49.35242	1
AGCAGTG	121365	47.004723	2
TCAACGC	122350	46.615284	12
ATCAACG	122660	46.55835	11
CAACGCA	122680	46.546238	13
GTATCAA	123180	46.372475	9
TATCAAC	123390	46.27694	10
TGGTATC	123390	46.173985	7
GTGGTAT	123890	46.018467	6
GGTATCA	124265	45.88756	8
AGTGGTA	124435	45.84509	5
AACGCAG	124600	45.844772	14
AGAGTAC	124130	45.80668	19
ACGCAGA	125140	45.64534	15
CAGTGGT	124980	45.575966	4
GTACTTT	122680	45.455757	22
CAGAGTA	125855	45.27461	18
CGCAGAG	126345	45.18878	16
GCAGAGT	126200	45.11995	17
GAGTACT	125315	44.888832	20