FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281564

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281564
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18871063
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GATGCTA60850.016.898251
GCGCGAT35600.016.8300741
CAATGGA69100.016.8174068
TTTATGC49200.016.8131711
TCTATTG59200.016.676491
CTAATGG52400.016.5308741
GGTATTG36150.016.4910071
CGATTGA53150.016.4858021
TGATTTC45400.016.4138181
ATTGGTG59350.016.3646891
AAACCTG71950.016.3626981
TGCGGGT34400.016.2831651
ATGAATG38700.016.22841610
ACTGATG47300.016.1985761
TTGACTT49450.016.1617981
CGGACTG39250.016.1569291
TGCGTGG44850.016.1467571
GGATTAC50650.016.1343631
GTGATAA36700.016.131948
CCGGGAT41550.016.1051311
Produced by FastQC (version 0.11.5)