EGAF00005281568 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281568
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19503900
Sequences flagged as poor quality	0
Sequence length	58
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	321639	1.649100949040961	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	49636	0.2544926912053487	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	40948	0.2099477540389358	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	33786	0.17322689308292188	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	32197	0.16507980455191013	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	23966	0.12287798850486313	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	19782	0.10142586867241937	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG	19764	0.10133357943795855	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	116280	49.458687	1
AGCAGTG	121335	47.34636	2
ATCAACG	122975	46.76117	11
TCAACGC	122860	46.743683	12
CAACGCA	123175	46.69333	13
GTATCAA	123595	46.455185	9
TATCAAC	123905	46.378956	10
TGGTATC	123560	46.33691	7
GGTATCA	124485	46.0635	8
GTGGTAT	124350	46.047516	6
AACGCAG	124940	46.03969	14
AGAGTAC	124530	45.996822	19
AGTGGTA	124825	45.89402	5
CAGTGGT	124995	45.783176	4
ACGCAGA	125910	45.676746	15
GTACTTT	123500	45.517803	22
CAGAGTA	126380	45.4202	18
CGCAGAG	127005	45.27219	16
GCAGAGT	127010	45.17204	17
GAGTACT	125800	45.032272	20