EGAF00005281574 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00005281574
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	16742274
Sequences flagged as poor quality	0
Sequence length	58
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT	322134	1.9240755467268067	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAA	42567	0.2542486164065885	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	41691	0.24901635225895838	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTA	35804	0.21385386477368604	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAA	34428	0.20563514848699763	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG	22549	0.1346830185672508	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAAA	20607	0.12308363845914838	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGG	19598	0.11705697804252875	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAT	17849	0.10661036846010286	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	118795	49.82701	1
AGCAGTG	124190	47.611855	2
ATCAACG	127175	46.46553	11
TCAACGC	127175	46.40177	12
CAACGCA	127455	46.343716	13
GTATCAA	128055	46.161663	9
TGGTATC	127785	46.132736	7
TATCAAC	128280	46.09893	10
CAGTGGT	128300	45.983295	4
AGTGGTA	128450	45.96265	5
GTGGTAT	128370	45.938427	6
GGTATCA	128715	45.86806	8
AACGCAG	128985	45.810165	14
AGAGTAC	128755	45.771263	19
ACGCAGA	129500	45.632133	15
GTACTTT	127280	45.379684	22
CAGAGTA	130250	45.31918	18
CGCAGAG	130680	45.202198	16
GCAGAGT	130555	45.154503	17
GAGTACT	129585	44.964737	20