FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281614

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281614
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21749777
Sequences flagged as poor quality0
Sequence length8
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCTCGGGC651186729.939925361073815No Hit
CACGCCTT598506827.517836159883384No Hit
AGGATACA486692822.376909887397925No Hit
GTATATAG404049418.57717437746603No Hit
CACGCCTA477490.21953788307806557No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)