FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281615

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281615
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21749777
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TTTATGC60100.017.315151
ATGCGAT61650.017.2693481
GGTATTG68400.017.2328261
TGATTTC62250.017.1189691
ATGAATG54050.016.85269710
GTACTTT67850.016.8268621
CAATGAA61350.016.8194528
CGGACTG50900.016.749011
TCTATTG59950.016.724221
CCGGGAT50400.016.6967831
GGGACCT58900.016.6825921
ACCTTTA88200.016.6428951
GATGCTA56850.016.5801241
CTTTGCG60500.016.5556431
CTGATAG65650.016.5219731
CAACTAG106350.016.4558261
CGACCTT71000.016.4185541
CTAATGG61200.016.3826311
GTGATAA43950.016.3347438
GACTAAC60150.016.2360921
Produced by FastQC (version 0.11.5)