FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281636

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281636
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences40771011
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGAATG109400.017.2383731
TGCGGGT112000.017.0792521
CAATGGA154600.016.9798498
ACTGATG114450.016.8621671
GAATGAA122000.016.7857991
TTTATGC97950.016.7115291
GCGCGAT77700.016.678461
GGGAGAT84850.016.6282711
ATGCGAT76250.016.615321
CTGCCTA146750.016.6122151
TGCGTGG113150.016.5963631
CCGGGAT83550.016.444181
CGACCTT135450.016.3739871
ACTGAAC102050.016.3242761
GGCGACT95650.016.2665921
GTAACTG113850.016.2659661
GGTATTG88550.016.2496551
GGAACTT113750.016.2363131
TACGGAT88050.016.2170091
GACTAAC111000.016.152111
Produced by FastQC (version 0.11.5)