FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281655

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281655
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences65638495
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTCAT2184025533.273546262753285No Hit
CCAGGGCA1945734229.6431872790502No Hit
AATAATGG1524050623.21885350966685No Hit
GTGTCATC831283012.664565206743392No Hit
AATAATGA729430.11112838586564179No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)