FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281661

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281661
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences41752258
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCTCAT1386242633.20161989801845No Hit
CCAGGGCA1232357129.515938994245534No Hit
AATAATGG971675423.272403614673966No Hit
GTGTCATC528303912.653301289717072No Hit
AATAATGA476680.11416867561989102No Hit
TGCCTCAA419250.10041373091725962No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)