FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281665

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281665
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17702548
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATTG59800.017.7163721
ATCGAGT45250.017.2004971
CCTTACG64350.016.992281
CGGACTG43250.016.9781341
CGGACGT47300.016.9626311
GATGCTA49400.016.727581
CAATGGA51450.016.677368
ATGCGAT34950.016.630641
TAAATGA34600.016.5616159
TACTTGT55700.016.470021
TGCGGGT37850.016.4665321
GACTAAC52050.016.4525431
ATGAATG34850.016.38532410
GCGCGAT33300.016.343111
CGCTTCA57000.016.3225541
TACGGAT38450.016.2355961
TTGACTT51100.016.2298161
TTTATGC36050.016.1509361
GGAACTT44250.016.1422821
CGCTGGA46400.016.0195671
Produced by FastQC (version 0.11.5)