FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281670

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281670
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17375868
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCCGTT482986527.796395552728647No Hit
TTGTTTCC470378927.070814534272476No Hit
CCTAACAA388596922.364171965394764No Hit
GGAGGAGG363349220.91113951832507No Hit
AACCCGTA322430.1855619529338045No Hit
TTGTTTCA257280.14806742316412624No Hit
ACCCCGTT215270.12389021371479111No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)