FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281671

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281671
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17375868
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATTG62300.017.5596941
ATCGAGT43350.016.8853361
GCGCGAT33950.016.7594661
GGCGACT36950.016.724831
CGGACTG45550.016.7064421
GATGCTA46350.016.6554091
TGCGGGT36450.016.6250421
ATGCGAT34900.016.5897881
CCTTACG59000.016.4910581
TAAATGA35950.016.467569
CAATGGA50900.016.3853118
TCTAACT64150.016.3681328
TACTTGT54900.016.3565481
CGGACGT46100.016.2468281
ATGAATG36650.016.2082610
CGCTGGA45500.016.131411
TGGCTGG56050.016.1279981
CGATTGA45600.016.0960351
ACTGATG40050.016.0794451
TGATTTC39550.016.055171
Produced by FastQC (version 0.11.5)