FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281677

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281677
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17831366
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCCGTT496124127.823112374004328No Hit
TTGTTTCC483307327.104334014567367No Hit
CCTAACAA398793822.364736386432764No Hit
GGAGGAGG372891720.912121931656834No Hit
AACCCGTA321060.18005350795895278No Hit
TTGTTTCA264510.14833972899215908No Hit
ACCCCGTT227840.12777484349768828No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)