FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281682

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281682
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences17237768
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AACCCGTT479304527.80548502567154No Hit
TTGTTTCC466397027.05669318672812No Hit
CCTAACAA385842022.383524363479076No Hit
GGAGGAGG360917220.9375831024063No Hit
AACCCGTA318640.18484991792440877No Hit
TTGTTTCA260230.15096502052934No Hit
ACCCCGTT202930.11772405801029462No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)