FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281689

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281689
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18876298
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAATGAA63700.017.2298811
GGTATTG51950.017.217381
GGGAATG45150.016.8854391
GGAATAA67250.016.855931
TCTATTG55150.016.7807481
CAATGGA55150.016.736978
TGATTTC56800.016.7160241
GACTAAC60400.016.7135751
GGAACTT53100.016.6749251
TAAATGA41800.016.651519
CGGACGT44850.016.6191561
GGGACCT49050.016.6035351
ATGCGAT39600.016.5991291
ACTGATG52550.016.4686681
ATCGAGT46650.016.4282861
ATTGGTG48550.016.4035931
GATGCTA48400.016.3510721
TAGTTGG49100.016.3013521
TATTGAG25650.016.2174193
ATAACGC71500.016.161851
Produced by FastQC (version 0.11.5)