FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281692

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281692
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18696608
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GAATGAA60250.017.2837921
GGTATTG49000.017.0261061
ATGCGAT38500.017.018681
GGGAATG46050.017.008951
GGAATAA70250.016.7885361
GGGACCT44300.016.7550411
ATCGAGT44150.016.6986791
ATTGGTG46900.016.6580261
TAAATGA42800.016.6568349
TGATTTC54100.016.6044461
GGAACTT50750.016.5769771
CAATGGA55100.016.51348
GATGCTA44350.016.4880431
CTAATGG52300.016.4682251
CTGATAG52400.016.4558891
CGACCTT60450.016.4488471
GACTAAC62600.016.4432011
GGATTAC54200.016.2600541
CTTTGCG45550.016.2513221
TACTTGT53550.016.1958961
Produced by FastQC (version 0.11.5)