FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281695

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281695
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences18535708
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATTG46050.017.2417221
GAATGAA61900.017.0109081
GGGAATG44950.016.9962651
GACTAAC57750.016.7788281
ATTGGTG46500.016.6232661
TAAATGA41100.016.5939129
TACTTGT53400.016.5539191
ACTGATG53350.016.550691
GGAATAA68550.016.5131051
TCTATTG54450.016.5101721
GATGCTA45500.016.4391751
ATCGAGT46400.016.4220281
GGGACCT47550.016.361341
ATAACGC72850.016.3482781
TGATTTC52550.016.3459531
CGGACGT43950.016.3363631
TGGCTGG56450.016.3149411
GGAACTT50650.016.3076131
CTAATGG48100.016.2574161
CGGACTG39650.016.1912981
Produced by FastQC (version 0.11.5)