FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281746

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281746
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31704340
Sequences flagged as poor quality0
Sequence length8
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACCCTCCT1011358431.899683134864187No Hit
CAATGGAG771544624.33561461932341No Hit
GTTGCAGC717604122.634254490079275No Hit
TGGAATTA632717119.956797712868333No Hit
ACCCTCCA404910.12771437601287394No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)