FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences31370450
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT79100.017.5113371
GGTATTG73100.016.9101371
TTTATGC72300.016.8205931
TAAATGA63650.016.699879
GACCTGG119450.016.6782021
ATCGAGT73400.016.6502671
CTCGAAA82600.016.5513921
GTCGACT66850.016.4987988
GTAAATG91350.016.4633248
CCGGGAT56650.016.2771021
ACTGAAC88200.016.2602271
ACTGATG74200.016.2416131
TTGACTT93000.016.2167721
GGGAGAT65500.016.215461
CGTTGGG101500.016.1889081
CTGCCTA103100.016.1607841
CAATGGA100750.016.1579978
TGGCTGG97550.016.1370241
GCGCGAT54650.016.1224781
CGACCTT97450.016.1125351
Produced by FastQC (version 0.11.5)