FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281764

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281764
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38605350
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT91700.017.4717481
CGATTGA110400.016.9672681
GGGACCT102750.016.8094581
CGACCTT144650.016.6833061
ATCGAGT91450.016.6665021
TGCGGGT83100.016.560011
GGTATTG89350.016.5097561
CCCTCCT261350.016.4508421
CCGGGAT81850.016.4219151
CTGATAG97300.016.3633961
TCTATTG111700.016.3489861
GGGAATG78700.016.3040371
GTAAATG99150.016.2071748
GACCTGG125950.016.2064551
GAATGAA85650.016.1954231
GGGAGAT94750.016.1915841
CTTTGCG90150.016.1857471
CCTTACG124450.016.1767791
GCGCGAT71250.016.1700291
AAACCTG121400.016.1630571
Produced by FastQC (version 0.11.5)