FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281767

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281767
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences38191295
Sequences flagged as poor quality0
Sequence length26
%GC51

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
ATGCGAT93800.017.4452061
CGATTGA106150.016.9985641
GGTATTG91200.016.8238811
GGGACCT100250.016.7817521
CGACCTT143400.016.754041
CCGGGAT83900.016.618681
ATCGAGT86950.016.5073741
CTAATGG113250.016.4097961
CCCTCCT261450.016.2935121
GAATGAA85100.016.2785571
GATCTAG99800.016.2460631
TACGGAT95150.016.2095621
CCTTACG122100.016.178831
GGGAATG78850.016.160821
CTCGAAA90350.016.1518691
AAACCTG122450.016.1489221
CTGATAG102150.016.1464841
TTTATGC74900.016.1450791
CTTTGCG87500.016.14071
GCGCGAT66400.016.1330741
Produced by FastQC (version 0.11.5)