FastQCFastQC Report
Wed 27 Apr 2022
EGAF00005281781

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281781
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35218437
Sequences flagged as poor quality0
Sequence length8
%GC49

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GAATTCCA964006127.372199964467477Illumina Small RNA Adapter 2 (100% over 8bp)
CGCGATAC950111926.977685011972564No Hit
TTTACATG841554323.895276783577874No Hit
ACGCGGGT729686420.718875173250876No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)