FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281790

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281790
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25603645
Sequences flagged as poor quality0
Sequence length8
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TCGCTTCG845002333.00320325484907No Hit
GTATGCTC658345025.71294048171657No Hit
CGTGCAGA575250422.46751976134648No Hit
AACAAGAT451838317.64742090432827No Hit
TCGCTTCA329900.12884884163954No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short

[OK]Kmer Content

No overrepresented Kmers

Produced by FastQC (version 0.11.5)