FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281791

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281791
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25603645
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGTATTG84750.017.3573131
GCGCGAT61950.017.3002761
TACTTGT82500.017.212081
ACTGATG78650.017.1767081
GGGAATG70150.017.161011
GGGAGAT64250.017.0391961
GTACTTT88850.016.9956071
CGGACTG64250.016.8211441
TTTATGC68200.016.756631
TCTATTG78500.016.7123641
TGACTAG63450.016.6704861
GGCGACT53100.016.6595271
TGATTTC85600.016.6588881
ACTGAAC74000.016.6332951
ACCTTTA99650.016.609751
CTAGCCT118850.016.4945371
TGCGGGT64350.016.4528831
CCGGGAT53900.016.4493921
GAATGAA67400.016.4358671
GACCTGG87200.016.4335521
Produced by FastQC (version 0.11.5)