FastQCFastQC Report
Sat 23 Apr 2022
EGAF00005281800

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00005281800
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences26181039
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGCGAT63400.017.3843841
TACTTGT82250.017.2671011
GGTATTG85850.017.265331
ACTGATG82500.017.2026541
GGGAATG69400.016.9910931
TGATTTC89550.016.9875451
CGGACTG68750.016.875331
GGGAGAT65650.016.864751
ATGCGAT52300.016.7521061
GACCTGG86250.016.721421
GTACTTT88750.016.6673581
TTTATGC67150.016.5922831
ACGGAGA85200.016.5166321
GGAACTT67150.016.473131
ACTGAAC79150.016.439681
TCTATTG80500.016.4248921
TGACTAG66250.016.3798851
GACTAAC63750.016.3789981
CCGGGAT56000.016.3596671
TGCGGGT66500.016.3183061
Produced by FastQC (version 0.11.5)